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Accelerated stochastic simulation algorithm for coupled chemical reactions with delays

Paper ID Volume ID Publish Year Pages File Format Full-Text
15348 1406 2008 3 PDF Available
Title
Accelerated stochastic simulation algorithm for coupled chemical reactions with delays
Abstract

Some biochemical processes do not occur instantaneously but have considerably delays associated with them. In the existed methods which solve these chemically reacting systems with delays, averaging over a great deal of simulations is needed for reliable statistical characters. Here we present an accelerating approach, called the “Delay Final All Possible Steps” (DFAPS) approach, which does not alter the course of stochastic simulation, but reduces the required running times. Numerical simulation results indicate that the proposed method can be applied to a wide range of chemically reacting systems with delays and obtain a significant improvement on efficiency and accuracy over the existed methods.

Keywords
Delay stochastic simulation algorithm; Delay final all possible steps approach; Chemically reacting system
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Accelerated stochastic simulation algorithm for coupled chemical reactions with delays
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Publisher
Database: Elsevier - ScienceDirect
Journal: Computational Biology and Chemistry - Volume 32, Issue 4, August 2008, Pages 240–242
Authors
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Subjects
Physical Sciences and Engineering Chemical Engineering Bioengineering
Get Full-Text Now
Don't Miss Today's Special Offer
Price was $35.95
You save - $31
Price after discount Only $4.95
100% Money Back Guarantee
Full-text PDF Download
Online Support
Any Questions? feel free to contact us