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Search of regular sequences in promoters from eukaryotic genomes

Paper ID Volume ID Publish Year Pages File Format Full-Text
15379 1408 2009 9 PDF Available
Title
Search of regular sequences in promoters from eukaryotic genomes
Abstract

In this paper, the notion of “regularity” is introduced to describe the structural features of DNA sequences. This notion expands the “latent periodicity” term. The novel method for revealing regularity based on the runs test is described. The search of regular sequences in eukaryotic promoters has shown that more than 60% of them possess a regularity property on statistically significant level. Possible biological functions of regularity are discussed together with the possibility of using this characteristic for performing promoter annotation.

Keywords
DNA sequence analysis; Periodicity; Promoters; Protein binding sites; Regularity
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Search of regular sequences in promoters from eukaryotic genomes
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Publisher
Database: Elsevier - ScienceDirect
Journal: Computational Biology and Chemistry - Volume 33, Issue 3, June 2009, Pages 196–204
Authors
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Subjects
Physical Sciences and Engineering Chemical Engineering Bioengineering
Get Full-Text Now
Don't Miss Today's Special Offer
Price was $35.95
You save - $31
Price after discount Only $4.95
100% Money Back Guarantee
Full-text PDF Download
Online Support
Any Questions? feel free to contact us